CDS

Accession Number TCMCG051C17544
gbkey CDS
Protein Id XP_002307405.1
Location complement(join(18554104..18554321,18554664..18554765,18557012..18557414,18558198..18559133))
Gene LOC7469117
GeneID 7469117
Organism Populus trichocarpa

Protein

Length 552aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002307369.2
Definition serine hydroxymethyltransferase 7 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category E
Description Serine hydroxymethyltransferase
KEGG_TC -
KEGG_Module M00140        [VIEW IN KEGG]
M00141        [VIEW IN KEGG]
M00346        [VIEW IN KEGG]
M00532        [VIEW IN KEGG]
KEGG_Reaction R00945        [VIEW IN KEGG]
R09099        [VIEW IN KEGG]
KEGG_rclass RC00022        [VIEW IN KEGG]
RC00112        [VIEW IN KEGG]
RC01583        [VIEW IN KEGG]
RC02958        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00600        [VIEW IN KEGG]
EC 2.1.2.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00260        [VIEW IN KEGG]
ko00460        [VIEW IN KEGG]
ko00630        [VIEW IN KEGG]
ko00670        [VIEW IN KEGG]
ko00680        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01120        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01200        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
ko01523        [VIEW IN KEGG]
map00260        [VIEW IN KEGG]
map00460        [VIEW IN KEGG]
map00630        [VIEW IN KEGG]
map00670        [VIEW IN KEGG]
map00680        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01120        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01200        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
map01523        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004372        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005759        [VIEW IN EMBL-EBI]
GO:0006730        [VIEW IN EMBL-EBI]
GO:0006732        [VIEW IN EMBL-EBI]
GO:0006790        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0016742        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044030        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046500        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050801        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0055063        [VIEW IN EMBL-EBI]
GO:0055081        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072505        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0098771        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATTTAACACAAGCAGCACAATCAGGTCTCTCACTTGGATTTCACTCAAGTCCAATTCCACTACAATTACTCGATCAAAAACAAGAAACCCGCATCGATAACGAAGAGAATCAAACCGAAGATGAGCAATTTAGCATTTTGGGTCACCAAATGTGTATAAAGAGACCGAGAGATAACAGTTCTCAATCATCAGCGTCATCGTCGACGACAAATTCTTCCAAACGGGTTGCCATGGACCCTGGTTTGGAGTCTCGTCGGGCCATGGTTCGGGCATGGGGAAACCACCCGCTTCCAATCGCAGATCCTGAGATTCATGAGATTATGGAGAAGGAGAAGCAAAGGCAGTTTAAAGGTATTGAATTGATTGCGTCTGAGAATTTTGTTTGCCGTGCTGTTATGGAAGCTCTTGGTAGTCATTTAACTAATAAATATTCTGAGGGATTGCCTGGTTCCAGATATTATACGGGAAATCAAAATATTGATCAAATTGAATTGATTTGTTGGAGTCGCGCCTTGGCAGCTTTTGGACTTGATTCTGATAAATGGGGTGTTAATGTGCAGCCATATTCCTGTACTTCAGCGAATTTTGCTGTTTACACAGGGCTTTTGTTGCCTGGGGATAGGATCATGGGGTTAGATTCTCCTTCTGGAGGACATTTGAGTCATGGGTATTATACACCGGGAGGGAAAAGGGTCTCGGCTTCTTCGATTTTTTTTGAGAGTCTGCCTTATAAAGTGAACCCGCAAACTGGGTATATTGATTATGATAAGATGGAGGAGAAGGCTATGGATTTTAGACCTAAGATACTGATCTGTGGTGGGAGTTCCTATCCGAGGGAGTGGGATTATGCGAGGTTTAGACAAGTTGCTGATAGGATTGGTGCTGTTTTGATGTGTGATATGGCTCACATTAGCGGGCTTGTGGCAGCTAAGGAATGTGTTAGTCCATTTGAATATTGTGATATTGTTACCTCTACAACTCACAAAAGCCTTCGAGGTCCTAGAGGGGGGATTATTTTTTATAGGAAAGGCCCAAAATTGAGGAAGCAGGGCATGCTTAGTCATGGTGATGGTAGCAGCCATTATGATTTTGAAGAAAAGATAAATTTTGCAGTCCATCCATCATTACAAGGGGGTCCTCACAATAATCACATCGCTGCTCTTGCCATAGCCTTAAAACAAGTGGCTACACCAGAGTACAAAGCATATATGCAACAGGTGAGGAAAAATGCTCAGGCATTAGCGTCTGCTTTGTTGAGAAGAAAATGCAGATTGGTGACTGGCGGTACTGATAACCATTTGGTGCTGTGGGATCTAACAACTTGGGGCTTAGCAGGCAAGTGTTATGAGAAGGTGTGTGAAATGTGCCAAATCACTCTAAATAAAAGTGCCATATTTGGTGACAATGGTGCTATCTGTCCTGGAGGAGTGAGAATCGGTACTCCTGCTATGACATCAAGAGGTTGCTTAGAGGCTGATTTCGAGAAAATTGCTGACTTTCTTCTTAAGGCCTCTCATATAACGACTGTTGTGCAGAGGGAACATGGAAAAAAGGATTTTCTCAAAGGTCTTCATAACAATAAAGAAATTGTTGAGCTTCGAAACCGGGTTGAGATATTTGCTTCTCAGTTTGCCATGCCAGGATTTGACGTTTGA
Protein:  
MDLTQAAQSGLSLGFHSSPIPLQLLDQKQETRIDNEENQTEDEQFSILGHQMCIKRPRDNSSQSSASSSTTNSSKRVAMDPGLESRRAMVRAWGNHPLPIADPEIHEIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGLPGSRYYTGNQNIDQIELICWSRALAAFGLDSDKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYYTPGGKRVSASSIFFESLPYKVNPQTGYIDYDKMEEKAMDFRPKILICGGSSYPREWDYARFRQVADRIGAVLMCDMAHISGLVAAKECVSPFEYCDIVTSTTHKSLRGPRGGIIFYRKGPKLRKQGMLSHGDGSSHYDFEEKINFAVHPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVRKNAQALASALLRRKCRLVTGGTDNHLVLWDLTTWGLAGKCYEKVCEMCQITLNKSAIFGDNGAICPGGVRIGTPAMTSRGCLEADFEKIADFLLKASHITTVVQREHGKKDFLKGLHNNKEIVELRNRVEIFASQFAMPGFDV